Background

Updated $\LaTeX$ version

From this $\TeX$-SE question about tlmgr, we see some advantages of installing $\TeX$Live directly from the official site:

1. avoid errors due to outdated version of $\TeX$Live supplied by the OS’s package manager
2. easier to manage packages with tlmgr.
3. enjoy the newer version of $\TeX$Live not yet available in your current GNU/Linux version.

The installation took about 30 minutes and 5G in the disk. I’ve chosen a local installation as this didn’t require sudo privileges. The whole process went smooth and the system displayed a message about setting

Update: Thanks to JuliaRegistries/General#647, the version cap of the package Distributions has now been removed, so that one can directly install the package GLM along with Distributions v0.19.2.

Background

I’m reading the book Statistics with Julia, which makes use of GLM.

Problem

I encountered the following error, which I posted in the issue GLM.jl#311.

(v1.1) pkg> add GLM
 Resolving package versions...
ERROR: Unsatisfiable requirements detected for package GLM [38e38edf]:
 GLM [38e38edf] log:
 ├─possible versions are: [0.2.0-0.2.5, 0.3.0-0.3.2, 0.4.0-0.4.8, 0.5.0-0.5.6, 0
.6.0-0.6.1, 0.7.0, 0.8.0-0.8.1, 0.9.0, 0.10.0-0.10.1, 0.11.0, 1.0.0-1.0.2, 1.1.0
-1.1.1] or uninstalled
 ├─restricted to versions * by an explicit requirement, leaving only versions [0
.2.0-0.2.5, 0.3.0-0.3.2, 0.4.0-0.4.8, 0.5.0-0.5.6, 0.6.0-0.6.1, 0.7.0, 0.8.0-0.8
.1, 0.9.0, 0.10.0-0.10.1, 0.11.0, 1.0.0-1.0.2, 1.1.0-1.1.1]
 ├─restricted by compatibility requirements with DataFrames [a93c6f00] to versio
ns: [0.4.0-0.4.8, 0.5.0-0.5.6, 0.6.0-0.6.1, 0.7.0, 0.8.0-0.8.1, 0.9.0, 0.10.0-0.
10.1, 0.11.0, 1.0.0-1.0.2, 1.1.0-1.1.1] or uninstalled, leaving only versions: [
0.4.0-0.4.8, 0.5.0-0.5.6, 0.6.0-0.6.1, 0.7.0, 0.8.0-0.8.1, 0.9.0, 0.10.0-0.10.1,
 0.11.0, 1.0.0-1.0.2, 1.1.0-1.1.1]
 │ └─DataFrames [a93c6f00] log:
 │   ├─possible versions are: [0.1.0, 0.2.0-0.2.5, 0.3.0-0.3.16, 0.4.0-0.4.3, 0.
5.0-0.5.12, 0.6.0-0.6.11, 0.7.0-0.7.8, 0.8.0-0.8.5, 0.9.0-0.9.1, 0.10.0-0.10.1, 
0.11.0-0.11.7, 0.12.0, 0.13.0-0.13.1, 0.14.0-0.14.1, 0.15.0-0.15.2, 0.16.0, 0.17
.0-0.17.1, 0.18.0-0.18.2] or uninstalled
 │   └─restricted to versions 0.18.2 by an explicit requirement, leaving only ve
rsions 0.18.2
 ├─restricted by compatibility requirements with StatsBase [2913bbd2] to version
s: [0.11.0, 1.0.0-1.0.2, 1.1.0-1.1.1] or uninstalled, leaving only versions: [0.
11.0, 1.0.0-1.0.2, 1.1.0-1.1.1]
 │ └─StatsBase [2913bbd2] log:
 │   ├─possible versions are: [0.1.0, 0.2.0-0.2.1, 0.2.3-0.2.10, 0.3.0-0.3.13, 0
.4.0-0.4.4, 0.5.0-0.5.3, 0.6.0-0.6.16, 0.7.0-0.7.4, 0.8.0-0.8.3, 0.9.0, 0.10.0, 
0.11.0-0.11.1, 0.12.0, 0.13.0-0.13.1, 0.14.0-0.14.1, 0.15.0, 0.16.0-0.16.1, 0.17
.0, 0.18.0, 0.19.0-0.19.5, 0.20.0-0.20.1, 0.22.0, 0.23.0-0.23.1, 0.24.0, 0.25.0,
 0.26.0, 0.27.0, 0.28.0-0.28.1, 0.29.0, 0.30.0] or uninstalled
 │   └─restricted to versions 0.30.0 by an explicit requirement, leaving only ve
rsions 0.30.0
 └─restricted by compatibility requirements with Distributions [31c24e10] to ver
sions: uninstalled — no versions left
   └─Distributions [31c24e10] log:
     ├─possible versions are: [0.1.0-0.1.4, 0.2.0-0.2.13, 0.3.0, 0.6.4-0.6.7, 0.
7.0-0.7.6, 0.8.0-0.8.10, 0.9.0, 0.10.0-0.10.2, 0.11.0-0.11.1, 0.12.0-0.12.5, 0.1
3.0, 0.14.0-0.14.2, 0.15.0, 0.16.0-0.16.4, 0.17.0, 0.18.0, 0.19.1-0.19.2] or uni
nstalled
     └─restricted to versions 0.19.2 by an explicit requirement, leaving only ve
rsions 0.19.2

Discussion

Although the packages StatsBase and DataFrames appear in the above error message, the cause of this problem was actually the package Distributions.

Problem

The touchpad on my new Ubuntu 18.04 LTS laptop was frozen. Toogling 🖱 with <Fn>-<F4> didn’t worked.

Attempt

1. Logout: didn’t work at all
2. Reboot: worked most of the time

Partial solution

After changing the Mouse Click Emulation in Keyboard & Mouse in Ubuntu Tweak from the default “Fingers” (2 fingers for right click; 3 fingers for middle click) to “Area” (Right/middle click determined by clicked area), one might have to wait for next reboot.

Goal

To install Juno for convenient development in Julia.

Problem

After Juno installation, I received the following error.

Analysis

From the error message, the system had tried to find an executable file julia, which would then be executed by the shell /bin/sh. Nonetheless, it’s absent from the system’s environment $PATH, so Juno couldn’t find it.

I’ve only changed my $PATH in ZSHRC, which is user-specific.

Solution

This Stack Overflow question about $PATH setting on *nix has provided various solution. As I was in a hurry to get Julia run on Juno, I’ve taken the advice from the best answer. I prefer creating a separate shortcut under /usr/bin, rather than editing system-wide config files.

Problem

During the adoption of Mmark for math posts on this blog, I had to insert markup: mmark at the last line of front matter of the source file of each math post.

Seek help

I separated this into two SO questions

1. Sed conditional match and execute command with offset, and
2. A question about AWK multiple line recognition.

Solution

From #1., I learnt the use of variables in AWK scripts. From #2, some users explained how these variables can be used for multi-line regex search.

Goal

To create a copy button for my Math.SE comment template in order to save the trouble of copying and pasting.

My first attempt

I put the boilerplate inside a Markdown codeblock to prevent them from getting interpreted by Hugo’s Markdown parser. Under each codeblock, I placed the copy button.

Comment boilerplate goes here ...

📝

Another comment boilerplate goes here ...

📝

…

My page’s original layout

$(document).ready(function() {
  $('.copyBtn').click(function() {
    copy($(this).prev().children())
j  });
});

function copy(selector) {
  var screenTop = $(document).scrollTop();
  var $temp = $("<div>");
  $("body").append($temp);
  $temp.attr("contenteditable", true)
       .html($(selector).html()).select()
       .on("focus", function() { document.execCommand('selectAll',false,null) })
       .focus();
  document.execCommand("copy");
  $temp.remove();
  $('html, body').scrollTop(screenTop);
}

static/js/copyBtn.js at Git tag copyBtn0

Problem

During the installation of RCall.jl, the package wasn’t successfully built due to a missing variable $R_HOME.

$ julia -q
julia> Pkg.add("RCall")
 Resolving package versions...
 Installed WinReg ─ v0.3.1
 Installed RCall ── v0.13.2
  Updating `~/.julia/environments/v1.0/Project.toml`
  [6f49c342] + RCall v0.13.2
  Updating `~/.julia/environments/v1.0/Manifest.toml`
  [6f49c342] + RCall v0.13.2
  [1b915085] + WinReg v0.3.1
  Building RCall → `~/.julia/packages/RCall/ffM0W/deps/build.log`
┌ Error: Error building `RCall`:
│ ERROR: LoadError: R_HOME is not a directory.
│ Stacktrace:
│  [1] error(::String) at ./error.jl:33
│  [2] top-level scope at logging.jl:322
│  [3] top-level scope at /home/vin100/.julia/packages/RCall/ffM0W/deps/build.jl
:19
│  [4] include at ./boot.jl:317 [inlined]
│  [5] include_relative(::Module, ::String) at ./loading.jl:1041
│  [6] include(::Module, ::String) at ./sysimg.jl:29
│  [7] include(::String) at ./client.jl:388
│  [8] top-level scope at none:0
│ in expression starting at /home/vin100/.julia/packages/RCall/ffM0W/deps/build.
jl:10
└ @ Pkg.Operations /buildworkjr/worker/package_linux64/build/usr/share/julia/std
lib/v1.0/pkg/src/operations.jl:1069

Discussion

It took me a few minutes to realise that the cause of this error is the absence of R. I referred to CRAN’s installation instructions for Ubuntu and added

Tonight, the screen of Xubuntu suddenly enlarged and blurred. Typing “xubuntu screen display enlarged” on Google, I’ve learnt that the <Alt> key and the mouse scroll wheel can enlarge/minify screen display from Ubuntu Forums.

This is a linklog to Christopher Rackauckas’s article about Julia, Cython & Numba. Unluckily, I don’t have time to read this now. Hope I can return to this later.

Contexte

J’ai publié mon template de lettre en Xe$\LaTeX$ sur mon ancien blog (hébergé sur GitHub Pages) il y a trois ans.

Problème et solution

Après le changement de l’ordi portable, il me faut l’installation du pacquetage “texlive-lang-french” sur la nouvelle version d’Ubuntu. Sinon, une erreur du pacquetage Babel se surviendra.

! Package babel Error: Unknown option `frenchb'. Either you misspelled it
(babel)                or the language definition file frenchb.ldf was not foun
d.

See the babel package documentation for explanation.
Type  H <return>  for immediate help.


l.445 \ProcessOptions*

?

A ce stade, Xe$\LaTeX$ parviendra à compiler le fichier $\TeX$ avec une remarque à propos de l’obsolescence de l’option frenchb pour le pacquetage Babel.